Pseudomonas aeruginosa PAO1, PA1359

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0003677	DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF47413	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Gene3D	G3DSA:1.10.260.40	-	IPR010982	Lambda repressor-like, DNA-binding domain superfamily	37	108	1.5E-16
CDD	cd02209	cupin_XRE_C	-	-	127	210	2.47685E-14
SUPERFAMILY	SSF51182	RmlC-like cupins	IPR011051	RmlC-like cupin domain superfamily	88	213	2.49E-15
Pfam	PF07883	Cupin domain	IPR013096	Cupin 2, conserved barrel	160	207	1.8E-7
Gene3D	G3DSA:2.60.120.10	Jelly Rolls	IPR014710	RmlC-like jelly roll fold	127	216	7.2E-20
CDD	cd00093	HTH_XRE	IPR001387	Cro/C1-type helix-turn-helix domain	48	103	7.78516E-14
SUPERFAMILY	SSF47413	lambda repressor-like DNA-binding domains	IPR010982	Lambda repressor-like, DNA-binding domain superfamily	43	104	1.45E-14
PANTHER	PTHR46797	HTH-TYPE TRANSCRIPTIONAL REGULATOR	-	-	44	207	6.1E-26
Pfam	PF01381	Helix-turn-helix	IPR001387	Cro/C1-type helix-turn-helix domain	49	98	8.7E-13
SMART	SM00530	mbf_short4	IPR001387	Cro/C1-type helix-turn-helix domain	48	103	6.1E-14

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.