Pseudomonas aeruginosa PAO1, PA1397

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0000160	phosphorelay signal transduction system	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00072	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003677	DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF46894	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00038	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other PAO1 genes in this class Two-component regulatory systems Other PAO1 genes in this class

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
PseudoCAP		Two-component System		ECO:0000037 not_recorded

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF00072	Response regulator receiver domain	IPR001789	Signal transduction response regulator, receiver domain	5	117	5.3E-19
SMART	SM00448	REC_2	IPR001789	Signal transduction response regulator, receiver domain	3	117	6.8E-17
SMART	SM00421	luxrmega5	IPR000792	Transcription regulator LuxR, C-terminal	143	200	2.8E-20
Pfam	PF00196	Bacterial regulatory proteins, luxR family	IPR000792	Transcription regulator LuxR, C-terminal	146	198	1.3E-17
CDD	cd06170	LuxR_C_like	IPR000792	Transcription regulator LuxR, C-terminal	146	199	1.44013E-16
Gene3D	G3DSA:1.10.10.10	-	IPR036388	Winged helix-like DNA-binding domain superfamily	137	205	8.4E-21
PRINTS	PR00038	LuxR bacterial regulatory protein HTH signature	IPR000792	Transcription regulator LuxR, C-terminal	160	176	9.1E-12
PRINTS	PR00038	LuxR bacterial regulatory protein HTH signature	IPR000792	Transcription regulator LuxR, C-terminal	146	160	9.1E-12
PRINTS	PR00038	LuxR bacterial regulatory protein HTH signature	IPR000792	Transcription regulator LuxR, C-terminal	176	188	9.1E-12
CDD	cd17535	REC_NarL-like	-	-	5	120	4.96521E-36
SUPERFAMILY	SSF52172	CheY-like	IPR011006	CheY-like superfamily	3	127	5.55E-23
PANTHER	PTHR45566	HTH-TYPE TRANSCRIPTIONAL REGULATOR YHJB-RELATED	-	-	2	202	2.7E-50
Gene3D	G3DSA:3.40.50.2300	-	-	-	3	134	2.9E-23
SUPERFAMILY	SSF46894	C-terminal effector domain of the bipartite response regulators	IPR016032	Signal transduction response regulator, C-terminal effector	136	201	2.11E-18

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.