Pseudomonas aeruginosa PAO1, PA1408

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0055085	transmembrane transport	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00924	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0016020	membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF82689	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Membrane proteins Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF12607	Protein of unknown function (DUF3772)	IPR022249	Domain of unknown function DUF3772	140	200	9.2E-19
Coils	Coil	Coil	-	-	75	95	-
SUPERFAMILY	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region	IPR011014	Mechanosensitive ion channel MscS, transmembrane-2	540	624	3.92E-13
Pfam	PF00924	Mechanosensitive ion channel	IPR006685	Mechanosensitive ion channel MscS	584	781	4.5E-42
Gene3D	G3DSA:1.10.287.1260	-	-	-	540	640	3.3E-16
Gene3D	G3DSA:2.30.30.60	-	IPR023408	Mechanosensitive ion channel MscS, beta-domain superfamily	641	689	2.6E-14
PANTHER	PTHR30347	POTASSIUM CHANNEL RELATED	-	-	277	805	1.1E-99
SUPERFAMILY	SSF50182	Sm-like ribonucleoproteins	IPR010920	LSM domain superfamily	626	691	6.21E-16
Gene3D	G3DSA:3.30.70.100	-	-	-	699	786	3.0E-11
Coils	Coil	Coil	-	-	118	138	-
SUPERFAMILY	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain	IPR011066	Mechanosensitive ion channel MscS, C-terminal	700	792	4.18E-14

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.