Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0006355 | regulation of transcription, DNA-templated | Inferred from Direct Assay | ECO:0000314 direct assay evidence used in manual assertion |
1902216 | Reviewed by curator |
Biological Process | GO:0009405 | pathogenesis | Inferred from Mutant Phenotype | ECO:0000015 mutant phenotype evidence |
8454322 | Reviewed by curator |
Biological Process | GO:0051544 | positive regulation of elastin biosynthetic process | Inferred from Mutant Phenotype | ECO:0000015 mutant phenotype evidence |
1902216 | Reviewed by curator |
Molecular Function | GO:0003700 | DNA-binding transcription factor activity | Inferred from Direct Assay | ECO:0000314 direct assay evidence used in manual assertion |
1902216 | Reviewed by curator |
Biological Process | GO:0060310 | regulation of elastin catabolic process | Inferred from Mutant Phenotype | ECO:0000015 mutant phenotype evidence |
1902216 | Reviewed by curator |
Molecular Function | GO:0003677 | DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:SSF46894
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PF00196
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Database | Xref | Pathway | Version | Evidence | PMID |
---|---|---|---|---|---|
KEGG | pae02024 | Quorum sensing | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | pae02025 | Biofilm formation - Pseudomonas aeruginosa | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
PRINTS | PR00038 | LuxR bacterial regulatory protein HTH signature | IPR000792 | Transcription regulator LuxR, C-terminal | 207 | 219 | 1.7E-5 |
SUPERFAMILY | SSF75516 | Pheromone-binding domain of LuxR-like quorum-sensing transcription factors | IPR036693 | Transcription factor LuxR-like, autoinducer-binding domain superfamily | 9 | 160 | 2.62E-36 |
Pfam | PF00196 | Bacterial regulatory proteins, luxR family | IPR000792 | Transcription regulator LuxR, C-terminal | 176 | 231 | 2.9E-22 |
CDD | cd06170 | LuxR_C_like | IPR000792 | Transcription regulator LuxR, C-terminal | 177 | 233 | 5.85301E-20 |
PANTHER | PTHR44688 | - | - | - | 55 | 236 | 5.8E-21 |
Gene3D | G3DSA:1.10.10.10 | - | IPR036388 | Winged helix-like DNA-binding domain superfamily | 176 | 237 | 7.8E-17 |
PRINTS | PR00038 | LuxR bacterial regulatory protein HTH signature | IPR000792 | Transcription regulator LuxR, C-terminal | 177 | 191 | 1.7E-5 |
Gene3D | G3DSA:3.30.450.80 | - | IPR036693 | Transcription factor LuxR-like, autoinducer-binding domain superfamily | 1 | 173 | 5.4E-56 |
PRINTS | PR00038 | LuxR bacterial regulatory protein HTH signature | IPR000792 | Transcription regulator LuxR, C-terminal | 191 | 207 | 1.7E-5 |
SUPERFAMILY | SSF46894 | C-terminal effector domain of the bipartite response regulators | IPR016032 | Signal transduction response regulator, C-terminal effector | 170 | 237 | 7.82E-16 |
SMART | SM00421 | luxrmega5 | IPR000792 | Transcription regulator LuxR, C-terminal | 174 | 231 | 5.2E-19 |
Pfam | PF03472 | Autoinducer binding domain | IPR005143 | Transcription factor LuxR-like, autoinducer-binding domain | 18 | 160 | 1.2E-37 |