Pseudomonas aeruginosa PAO1, PA1452 (flhA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009306 protein secretion
ISS
Inferred from Sequence or Structural Similarity
ECO:0000250
sequence similarity evidence used in manual assertion
10049367 Reviewed by curator
Cellular Component GO:0009288 bacterial-type flagellum
ISS
Inferred from Sequence or Structural Similarity
ECO:0000250
sequence similarity evidence used in manual assertion
10049367 Reviewed by curator
Cellular Component GO:0098562 cytoplasmic side of membrane
ISS
Inferred from Sequence or Structural Similarity
ECO:0000250
sequence similarity evidence used in manual assertion
8002587 Reviewed by curator
Cellular Component GO:0016021 integral component of membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01398
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009306 protein secretion
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00771
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00771
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0044780 bacterial-type flagellum assembly
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01398
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Adaptation, Protection Other PAO1 genes in this class
Motility & Attachment Other PAO1 genes in this class
Chemotaxis Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae02040 Flagellar assembly 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCAP Flagella assembly ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.10.490.80 604 704 7.8E-12
PRINTS PR00949 Type III secretion system inner membrane A protein family signature IPR001712 Type III secretion system FHIPEP 161 179 1.5E-55
PRINTS PR00949 Type III secretion system inner membrane A protein family signature IPR001712 Type III secretion system FHIPEP 191 208 1.5E-55
Pfam PF00771 FHIPEP family IPR001712 Type III secretion system FHIPEP 31 696 2.2E-267
Gene3D G3DSA:3.40.30.60 370 512 3.8E-53
PRINTS PR00949 Type III secretion system inner membrane A protein family signature IPR001712 Type III secretion system FHIPEP 38 51 1.5E-55
ProSitePatterns PS00994 Bacterial export FHIPEP family signature. IPR025505 FHIPEP conserved site 147 170 -
PRINTS PR00949 Type III secretion system inner membrane A protein family signature IPR001712 Type III secretion system FHIPEP 75 94 1.5E-55
Gene3D G3DSA:1.10.8.540 513 600 7.0E-23
PIRSF PIRSF005419 IPR001712 Type III secretion system FHIPEP 7 707 3.2E-248
PRINTS PR00949 Type III secretion system inner membrane A protein family signature IPR001712 Type III secretion system FHIPEP 142 158 1.5E-55
TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA IPR006301 Flagellar biosynthesis protein FlhA 22 704 4.3E-261
PRINTS PR00949 Type III secretion system inner membrane A protein family signature IPR001712 Type III secretion system FHIPEP 242 256 1.5E-55

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.