Pseudomonas aeruginosa PAO1, PA1459

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd16432
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000156 phosphorelay response regulator activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd16432
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd16432
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008984 protein-glutamate methylesterase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd16432
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd16432
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Chemotaxis Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Chemotaxis ECO:0000037
not_recorded
KEGG pae02030 Bacterial chemotaxis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCyc CODH-PWY reductive acetyl coenzyme A pathway 19.5 ECO:0000250
sequence similarity evidence used in manual assertion 		12867747
KEGG pae02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 3 122 7.8E-24
Hamap MF_00099 Protein-glutamate methylesterase/protein-glutamine glutaminase [cheB]. IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type 3 368 39.291443
MobiDBLite mobidb-lite consensus disorder prediction - - 138 162 -
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 5 109 7.6E-21
PIRSF PIRSF000876 RR_chemtxs_CheB IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type 1 368 6.8E-130
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 3 109 4.98E-27
CDD cd17541 REC_CheB-like - - 3 126 4.76605E-61
SUPERFAMILY SSF52738 Methylesterase CheB, C-terminal domain IPR035909 Methylesterase CheB, C-terminal 182 367 3.79E-64
CDD cd16432 CheB_Rec IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase 186 365 3.34515E-95
Gene3D G3DSA:3.40.50.180 - IPR035909 Methylesterase CheB, C-terminal 180 366 3.0E-67
PANTHER PTHR42872 PROTEIN-GLUTAMATE METHYLESTERASE/PROTEIN-GLUTAMINE GLUTAMINASE - - 1 368 4.3E-127
FunFam G3DSA:3.40.50.2300:FF:000077 Chemotaxis response regulator - - 3 129 5.5E-58
FunFam G3DSA:3.40.50.180:FF:000001 Protein-glutamate methylesterase/protein-glutamine glutaminase - - 176 368 7.1E-96
Pfam PF01339 CheB methylesterase IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase 187 363 5.8E-58
Gene3D G3DSA:3.40.50.2300 - - - 2 131 3.0E-30
MobiDBLite mobidb-lite consensus disorder prediction - - 138 176 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.