Pseudomonas aeruginosa PAO1, PA1476 (ccmB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0017004 cytochrome complex assembly
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000250
sequence similarity evidence used in manual assertion		 7635817 Reviewed by curator
Molecular Function GO:0015232 heme transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30070
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30070
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015886 heme transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30070
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0017004 cytochrome complex assembly
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30070
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Membrane proteins Other PAO1 genes in this class
Transport of small molecules Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF03379 CcmB protein IPR003544 Cytochrome c-type biogenesis protein CcmB 7 218 3.3E-71
PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature - - 55 72 1.7E-69
PANTHER PTHR30070 HEME EXPORTER PROTEIN B IPR003544 Cytochrome c-type biogenesis protein CcmB 1 206 1.3E-35
PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature - - 134 157 1.7E-69
PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature - - 195 218 1.7E-69
NCBIfam TIGR01190 JCVI: heme exporter protein CcmB IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria 8 218 1.3E-85
PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature - - 78 101 1.7E-69
PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature - - 103 121 1.7E-69
PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature - - 29 50 1.7E-69
PIRSF PIRSF002764 CcmB IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria 1 222 1.0E-80

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.