Pseudomonas aeruginosa PAO1, PA1479 (ccmE)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0017004 cytochrome complex assembly
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000250
sequence similarity evidence used in manual assertion		 7635817 Reviewed by curator
Biological Process GO:0017004 cytochrome complex assembly
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF03100
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0020037 heme binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF03100
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0017003 protein-heme linkage
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF03100
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005886 plasma membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF82093
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Energy metabolism Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
MobiDBLite mobidb-lite consensus disorder prediction - - 139 162 -
Pfam PF03100 CcmE IPR004329 CcmE/CycJ protein 5 131 1.3E-46
FunFam G3DSA:2.40.50.140:FF:000104 Cytochrome c-type biogenesis protein CcmE - - 30 137 8.8E-37
Gene3D G3DSA:2.40.50.140 - IPR012340 Nucleic acid-binding, OB-fold 30 137 6.0E-35
SUPERFAMILY SSF82093 Heme chaperone CcmE IPR036127 CcmE-like superfamily 30 137 2.22E-40
PANTHER PTHR34128 CYTOCHROME C-TYPE BIOGENESIS PROTEIN CCME HOMOLOG, MITOCHONDRIAL IPR004329 CcmE/CycJ protein 3 155 1.7E-43
Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. IPR004329 CcmE/CycJ protein 2 141 33.701355

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.