Pseudomonas aeruginosa PAO1, PA4446 (algW)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0008233 peptidase activity
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 19298369 Reviewed by curator
Biological Process GO:0050896 response to stimulus
IDA
Inferred from Direct Assay 		ECO:0000002
direct assay evidence
Biological Process GO:0044267 cellular protein metabolic process
IDA
Inferred from Direct Assay 		ECO:0000002
direct assay evidence
Molecular Function GO:0004252 serine-type endopeptidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00834
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00228
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006508 proteolysis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00834
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Adaptation, Protection Other PAO1 genes in this class
Secreted Factors (toxins, enzymes, alginate) Other PAO1 genes in this class
Translation, post-translational modification, degradation Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00228 pdz_new IPR001478 PDZ domain 280 362 1.3E-12
Gene3D G3DSA:2.30.42.10 - IPR036034 PDZ superfamily 278 376 2.9E-25
PRINTS PR00834 HtrA/DegQ protease family signature IPR001940 Peptidase S1C 177 201 5.6E-54
Gene3D G3DSA:2.40.10.120 - - - 53 274 4.7E-77
Pfam PF13180 PDZ domain IPR001478 PDZ domain 281 370 6.7E-15
CDD cd00987 PDZ_serine_protease - - 280 368 3.53221E-24
PANTHER PTHR22939 SERINE PROTEASE FAMILY S1C HTRA-RELATED - - 32 369 1.9E-73
FunFam G3DSA:2.40.10.10:FF:000001 Periplasmic serine protease DegS - - 168 279 4.8E-41
PRINTS PR00834 HtrA/DegQ protease family signature IPR001940 Peptidase S1C 212 229 5.6E-54
Pfam PF13365 Trypsin-like peptidase domain - - 107 241 1.1E-29
Pfam PF02163 Peptidase family M50 IPR008915 Peptidase M50 262 370 8.8E-8
PRINTS PR00834 HtrA/DegQ protease family signature IPR001940 Peptidase S1C 320 332 5.6E-54
PRINTS PR00834 HtrA/DegQ protease family signature IPR001940 Peptidase S1C 137 157 5.6E-54
SUPERFAMILY SSF50156 PDZ domain-like IPR036034 PDZ superfamily 238 363 1.71E-22
PRINTS PR00834 HtrA/DegQ protease family signature IPR001940 Peptidase S1C 234 251 5.6E-54
SUPERFAMILY SSF50494 Trypsin-like serine proteases IPR009003 Peptidase S1, PA clan 51 272 6.4E-63
PRINTS PR00834 HtrA/DegQ protease family signature IPR001940 Peptidase S1C 116 128 5.6E-54

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.