Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA4462
|
Name |
rpoN
Synonym: ntrA |
Replicon | chromosome |
Genomic location | 4992870 - 4994363 (+ strand) |
Transposon Mutants | 2 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 2 transposon mutants in orthologs |
RefSeq | NP_253152.1 |
GI | 15599658 |
Affymetrix | PA4462_rpoN_at |
Entrez | 881022 |
GenBank | AAG07850.1 |
INSDC | AAG07850.1 |
NCBI Locus Tag | PA4462 |
protein_id(GenBank) | gb|AAG07850.1|AE004860_6|gnl|PseudoCAP|PA4462 |
TIGR | NTL03PA04463 |
UniParc | UPI000013457A |
UniProtKB Acc | P49988 |
UniProtKB ID | RP54_PSEAE |
UniRef100 | UniRef100_P49988 |
UniRef50 | UniRef50_P0A171 |
UniRef90 | UniRef90_P49988 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
RNA polymerase sigma-54 factor
|
Synonyms | |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | -29.12 |
Kyte-Doolittle Hydrophobicity Value | -0.438 |
Molecular Weight (kDa) | 56.1 |
Isoelectric Point (pI) | 4.43 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 397 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG004051 (536 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA4462
Search term: rpoN
Search term: RNA polymerase sigma-54 factor
|
Nucleotide sequence of the rpoN gene and characterization of two downstream open reading frames in Pseudomonas aeruginosa.
Jin S, Ishimoto K, Lory S
J Bacteriol 1994 Mar;176(5):1316-22
PubMed ID: 8113171
|
The Pseudomonas aeruginosa sensor kinase KinB negatively controls alginate production through AlgW-dependent MucA proteolysis.
Damron FH, Qiu D, Yu HD
J Bacteriol 2009 Apr;191(7):2285-95
PubMed ID: 19168621
|