Pseudomonas aeruginosa PAO1, PA5398 (dgcA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0047865 dimethylglycine dehydrogenase activity
IDA
Inferred from Direct Assay
ECO:0000314
direct assay evidence used in manual assertion
17951379 Reviewed by curator
Biological Process GO:0031457 glycine betaine catabolic process
IMP
Inferred from Mutant Phenotype
ECO:0000015
mutant phenotype evidence
17951379 Reviewed by curator
Molecular Function GO:0047866 dimethylglycine oxidase activity
IDA
Inferred from Direct Assay
ECO:0000314
direct assay evidence used in manual assertion
17951379 Reviewed by curator
Biological Process GO:0042426 choline catabolic process
IMP
Inferred from Mutant Phenotype
ECO:0000015
mutant phenotype evidence
17951379 Reviewed by curator
Molecular Function GO:0016491 oxidoreductase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00724
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0010181 FMN binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00724
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Amino acid biosynthesis and metabolism Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF51395 FMN-linked oxidoreductases - - 4 370 5.64E-98
PANTHER PTHR43656 BINDING OXIDOREDUCTASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G08260)-RELATED - - 1 647 0.0
PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature - - 393 412 1.9E-5
Gene3D G3DSA:3.40.50.720 - - - 392 679 4.1E-64
Gene3D G3DSA:3.50.50.60 - IPR036188 FAD/NAD(P)-binding domain superfamily 487 616 4.1E-64
PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature - - 608 624 1.9E-5
PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature - - 392 414 3.9E-7
Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase IPR023753 FAD/NAD(P)-binding domain 392 643 3.9E-10
PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature - - 609 623 3.9E-7
FunFam G3DSA:3.20.20.70:FF:000102 Putative N-methylproline demethylase - - 1 380 0.0
CDD cd04734 OYE_like_3_FMN - - 6 352 0.0
Gene3D G3DSA:3.20.20.70 Aldolase class I IPR013785 Aldolase-type TIM barrel 1 380 2.7E-106
Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal 6 342 5.4E-66
PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature - - 660 667 3.9E-7
SUPERFAMILY SSF51905 FAD/NAD(P)-binding domain IPR036188 FAD/NAD(P)-binding domain superfamily 380 683 2.72E-33

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.