Pseudomonas aeruginosa PAO1, PA5419 (soxG)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:1901053 sarcosine catabolic process
IMP
Inferred from Mutant Phenotype
ECO:0000015
mutant phenotype evidence
17951379 Reviewed by curator
Biological Process GO:1901053 sarcosine catabolic process
IMP
Inferred from Mutant Phenotype
ECO:0000315
mutant phenotype evidence used in manual assertion
17951385 Reviewed by curator
Molecular Function GO:0008115 sarcosine oxidase activity
IMP
Inferred from Mutant Phenotype
ECO:0000315
mutant phenotype evidence used in manual assertion
17951386 Reviewed by curator
Biological Process GO:1901053 sarcosine catabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01375
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.30.1360.120
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008115 sarcosine oxidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01375
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Amino acid biosynthesis and metabolism Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCyc CRNFORCAT-PWY creatinine degradation I 19.5 ECO:0000250
sequence similarity evidence used in manual assertion
12867747
KEGG pae00260 Glycine, serine and threonine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCAP glycine betaine catabolism ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR01375 JCVI: sarcosine oxidase subunit gamma family protein IPR006280 Sarcosine oxidase, gamma subunit, heterotetrameric 52 204 2.8E-61
Pfam PF04268 Sarcosine oxidase, gamma subunit family IPR007375 Sarcosine oxidase, gamma subunit 53 204 9.1E-106
Gene3D G3DSA:3.30.1360.120 Probable tRNA modification gtpase trme; domain 1 IPR027266 GTP-binding protein TrmE/Aminomethyltransferase GcvT, domain 1 38 205 1.6E-56
SUPERFAMILY SSF103025 Folate-binding domain - - 84 209 4.91E-21
Gene3D G3DSA:3.30.70.1520 Heterotetrameric sarcosine oxidase - - 46 127 1.6E-56

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.