Pseudomonas aeruginosa PAO1, PA5420 (purU2)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009152 purine ribonucleotide biosynthetic process
ISS
Inferred from Sequence or Structural Similarity
ECO:0000250
sequence similarity evidence used in manual assertion
7868604 Reviewed by curator
Molecular Function GO:0008864 formyltetrahydrofolate deformylase activity
ISS
Inferred from Sequence or Structural Similarity
ECO:0000250
sequence similarity evidence used in manual assertion
7868604 Reviewed by curator
Molecular Function GO:0008864 formyltetrahydrofolate deformylase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01927
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009058 biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF53328
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016742 hydroxymethyl-, formyl- and related transferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF53328
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006189 'de novo' IMP biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01927
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Nucleotide biosynthesis and metabolism Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae00670 One carbon pool by folate 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCAP One carbon pool by folate ECO:0000037
not_recorded
KEGG pae00630 Glyoxylate and dicarboxylate metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCAP Glyoxylate and dicarboxylate metabolism ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR01575 Formyltetrahydrofolate deformylase signature IPR004810 Formyltetrahydrofolate deformylase 237 259 1.6E-43
Gene3D G3DSA:3.30.70.260 1 89 5.8E-17
Gene3D G3DSA:3.40.50.170 90 285 2.4E-76
PRINTS PR01575 Formyltetrahydrofolate deformylase signature IPR004810 Formyltetrahydrofolate deformylase 259 284 1.6E-43
CDD cd04875 ACT_F4HF-DF 9 79 2.69828E-21
PRINTS PR01575 Formyltetrahydrofolate deformylase signature IPR004810 Formyltetrahydrofolate deformylase 42 54 1.6E-43
PRINTS PR01575 Formyltetrahydrofolate deformylase signature IPR004810 Formyltetrahydrofolate deformylase 91 113 1.6E-43
PIRSF PIRSF036480 5 285 1.2E-96
PRINTS PR01575 Formyltetrahydrofolate deformylase signature IPR004810 Formyltetrahydrofolate deformylase 10 36 1.6E-43
Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. IPR004810 Formyltetrahydrofolate deformylase 5 285 42.906
SUPERFAMILY SSF53328 IPR036477 Formyl transferase, N-terminal domain superfamily 92 284 3.53E-59
Pfam PF00551 Formyl transferase IPR002376 Formyl transferase, N-terminal 91 266 6.3E-36
PRINTS PR01575 Formyltetrahydrofolate deformylase signature IPR004810 Formyltetrahydrofolate deformylase 113 140 1.6E-43
CDD cd08648 FMT_core_Formyl-FH4-Hydrolase_C IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain 92 285 6.66882E-124

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.