Pseudomonas aeruginosa PAO1, PA5423

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Upstream Motifs

*Up to 500bp upstream
Name Start Stop Strand Evidence PMID
Palindrome 6104769 6104790 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details
Inverted repeat: TGCCGCCCGCC-N12-GGCGGGCGGCA 6105120 6105153 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details
Rho-independent transcription terminator TERM 1503 6104768 6104791 - ECO:0000246
computational combinatorial evidence used in automatic assertion
17313685 Details
Rho-independent transcription terminator TERM 1504 6104769 6104790 - ECO:0000246
computational combinatorial evidence used in automatic assertion
17313685 Details
Shine-Dalgarno sequence 6105053 6105057 - ECO:0000256
match to sequence model evidence used in automatic assertion
Details

Motifs annotated in this feature

Name Start Stop Strand Evidence PMID
VqsM binding site 6104503 6104517 - ECO:0000314
direct assay evidence used in manual assertion
25034696 Details