Pseudomonas aeruginosa PAO1, PA5452 (wbpW)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009243 O antigen biosynthetic process
IDA
Inferred from Direct Assay
ECO:0000314
direct assay evidence used in manual assertion
19659934 Reviewed by curator
Biological Process GO:0009103 lipopolysaccharide biosynthetic process
IMP
Inferred from Mutant Phenotype
ECO:0000015
mutant phenotype evidence
9781879 Reviewed by curator
Biological Process GO:0009298 GDP-mannose biosynthetic process
IDA
Inferred from Direct Assay
ECO:0000314
direct assay evidence used in manual assertion
9781879 Reviewed by curator
Biological Process GO:0005976 polysaccharide metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01050
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009058 biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00483
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000271 polysaccharide biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01479
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016779 nucleotidyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01050
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Cell wall / LPS / capsule Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCyc PWY-5659 GDP-mannose biosynthesis 19.5 ECO:0000250
sequence similarity evidence used in manual assertion
12867747
PseudoCyc MANGDPMET-PWY GDP-mannose metabolism 19.5 ECO:0000250
sequence similarity evidence used in manual assertion
12867747
KEGG pae00051 Fructose and mannose metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCAP Lipopolysaccharide biosynthesis ECO:0000037
not_recorded
PseudoCyc COLANSYN-PWY colanic acid building blocks biosynthesis 19.5 ECO:0000250
sequence similarity evidence used in manual assertion
12867747
KEGG pae02025 Biofilm formation - Pseudomonas aeruginosa 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae00520 Amino sugar and nucleotide sugar metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:2.60.120.10 Jelly Rolls IPR014710 RmlC-like jelly roll fold 355 461 1.4E-16
FunFam G3DSA:2.60.120.10:FF:000032 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase - - 355 472 4.0E-54
Pfam PF01050 Mannose-6-phosphate isomerase IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal 323 473 2.1E-67
CDD cd02213 cupin_PMI_typeII_C - - 344 471 2.22414E-67
SUPERFAMILY SSF51182 RmlC-like cupins IPR011051 RmlC-like cupin domain superfamily 189 477 4.12E-77
Pfam PF00483 Nucleotidyl transferase IPR005835 Nucleotidyl transferase domain 4 289 1.7E-51
Gene3D G3DSA:3.90.550.10 Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A IPR029044 Nucleotide-diphospho-sugar transferases 2 354 2.3E-114
SUPERFAMILY SSF53448 Nucleotide-diphospho-sugar transferases IPR029044 Nucleotide-diphospho-sugar transferases 2 286 4.41E-65
FunFam G3DSA:3.90.550.10:FF:000046 Mannose-1-phosphate guanylyltransferase (GDP) - - 2 358 7.3E-126
Coils Coil Coil - - 345 365 -
NCBIfam TIGR01479 JCVI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 2 477 0.0
CDD cd02509 GDP-M1P_Guanylyltransferase - - 2 285 5.90035E-119
PANTHER PTHR46390 MANNOSE-1-PHOSPHATE GUANYLYLTRANSFERASE - - 2 472 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.