Pseudomonas aeruginosa PAO1, PA5459

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009243 O antigen biosynthetic process
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 23341552 Reviewed by curator
Molecular Function GO:0008168 methyltransferase activity
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: UniProtKB:J7I4B7
 ECO:0000250
sequence similarity evidence used in manual assertion		 23341552 Reviewed by curator
Biological Process GO:0009103 lipopolysaccharide biosynthetic process
IMP
Inferred from Mutant Phenotype 		ECO:0000015
mutant phenotype evidence		 23341552 Reviewed by curator
Biological Process GO:0009103 lipopolysaccharide biosynthetic process
IMP
Inferred from Mutant Phenotype 		ECO:0000315
mutant phenotype evidence used in manual assertion		 23341552 Reviewed by curator
Molecular Function GO:0008757 S-adenosylmethionine-dependent methyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.40.50.150
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Cell wall / LPS / capsule Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP common polysaccharide antigen (CBA) biosynthesis ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF53335 S-adenosyl-L-methionine-dependent methyltransferases IPR029063 S-adenosyl-L-methionine-dependent methyltransferase superfamily 49 229 4.56E-34
CDD cd02440 AdoMet_MTases - - 62 164 4.98547E-8
Gene3D G3DSA:3.40.50.150 Vaccinia Virus protein VP39 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase superfamily 32 275 3.0E-32
Pfam PF08241 Methyltransferase domain IPR013216 Methyltransferase type 11 64 158 1.5E-17

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.