Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0006260 | DNA replication | Inferred from Sequence or Structural Similarity | ECO:0000250 sequence similarity evidence used in manual assertion |
4890764 | Reviewed by curator |
Molecular Function | GO:0003677 | DNA binding |
Inferred from Sequence or Structural Similarity
Term mapped from: UniProtKB:P00582
|
ECO:0000250 sequence similarity evidence used in manual assertion |
4890764 | Reviewed by curator |
Biological Process | GO:0090305 | nucleic acid phosphodiester bond hydrolysis | Inferred from Sequence or Structural Similarity | ECO:0000250 sequence similarity evidence used in manual assertion |
4890764 | Reviewed by curator |
Molecular Function | GO:0008408 | 3'-5' exonuclease activity | Inferred from Sequence or Structural Similarity | ECO:0000250 sequence similarity evidence used in manual assertion |
4890764 | Reviewed by curator |
Molecular Function | GO:0003887 | DNA-directed DNA polymerase activity | Inferred from Sequence or Structural Similarity | ECO:0000250 sequence similarity evidence used in manual assertion |
13563462 | Reviewed by curator |
Molecular Function | GO:0003677 | DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:cd09898
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006139 | nucleobase-containing compound metabolic process |
Inferred from Sequence Model
Term mapped from: InterPro:SM00474
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003676 | nucleic acid binding |
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.30.420.10
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006260 | DNA replication |
Inferred from Sequence Model
Term mapped from: InterPro:PF00476
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0008408 | 3'-5' exonuclease activity |
Inferred from Sequence Model
Term mapped from: InterPro:SM00474
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003887 | DNA-directed DNA polymerase activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF00476
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006261 | DNA-dependent DNA replication |
Inferred from Sequence Model
Term mapped from: InterPro:PR00868
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003824 | catalytic activity |
Inferred from Sequence Model
Term mapped from: InterPro:cd09898
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Database | Xref | Pathway | Version | Evidence | PMID |
---|---|---|---|---|---|
KEGG | pae03420 | Nucleotide excision repair | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | pae01100 | Metabolic pathways | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | pae00230 | Purine metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | pae03410 | Base excision repair | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | pae00240 | Pyrimidine metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | pae03440 | Homologous recombination | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | pae03030 | DNA replication | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
FunFam | G3DSA:3.40.50.1010:FF:000001 | DNA polymerase I | - | - | 1 | 169 | 1.7E-70 |
PRINTS | PR00868 | DNA-polymerase family A (pol I) signature | IPR002298 | DNA polymerase A | 739 | 764 | 1.0E-77 |
SMART | SM00475 | 53exo3 | IPR002421 | 5'-3' exonuclease | 4 | 266 | 2.6E-114 |
NCBIfam | TIGR00593 | JCVI: DNA polymerase I | IPR018320 | DNA polymerase 1 | 6 | 913 | 0.0 |
SUPERFAMILY | SSF47807 | 5' to 3' exonuclease, C-terminal subdomain | IPR036279 | 5'-3' exonuclease, C-terminal domain superfamily | 168 | 288 | 1.14E-28 |
SMART | SM00279 | HhH_4 | IPR008918 | Helix-hairpin-helix motif, class 2 | 170 | 205 | 6.1E-12 |
CDD | cd09859 | PIN_53EXO | - | - | 8 | 164 | 9.97775E-78 |
Pfam | PF02739 | 5'-3' exonuclease, N-terminal resolvase-like domain | IPR020046 | 5'-3' exonuclease, alpha-helical arch, N-terminal | 6 | 167 | 1.7E-51 |
PRINTS | PR00868 | DNA-polymerase family A (pol I) signature | IPR002298 | DNA polymerase A | 715 | 728 | 1.0E-77 |
FunFam | G3DSA:3.30.420.10:FF:000026 | DNA polymerase I | - | - | 309 | 526 | 1.3E-97 |
Gene3D | G3DSA:3.30.70.370 | - | - | - | 649 | 909 | 7.5E-115 |
CDD | cd09898 | H3TH_53EXO | IPR020045 | DNA polymerase I-like, H3TH domain | 170 | 250 | 1.39424E-24 |
SMART | SM00482 | polaultra3 | IPR001098 | DNA-directed DNA polymerase, family A, palm domain | 671 | 877 | 1.5E-118 |
PRINTS | PR00868 | DNA-polymerase family A (pol I) signature | IPR002298 | DNA polymerase A | 640 | 662 | 1.0E-77 |
PRINTS | PR00868 | DNA-polymerase family A (pol I) signature | IPR002298 | DNA polymerase A | 830 | 846 | 1.0E-77 |
Gene3D | G3DSA:1.20.1060.10 | Taq DNA Polymerase; Chain T, domain 4 | - | - | 527 | 643 | 1.1E-36 |
PRINTS | PR00868 | DNA-polymerase family A (pol I) signature | IPR002298 | DNA polymerase A | 860 | 873 | 1.0E-77 |
SUPERFAMILY | SSF56672 | DNA/RNA polymerases | IPR043502 | DNA/RNA polymerase superfamily | 506 | 913 | 0.0 |
PRINTS | PR00868 | DNA-polymerase family A (pol I) signature | IPR002298 | DNA polymerase A | 663 | 678 | 1.0E-77 |
Pfam | PF01612 | 3'-5' exonuclease | IPR002562 | 3'-5' exonuclease domain | 313 | 501 | 1.0E-37 |
CDD | cd08637 | DNA_pol_A_pol_I_C | - | - | 532 | 910 | 0.0 |
PRINTS | PR00868 | DNA-polymerase family A (pol I) signature | IPR002298 | DNA polymerase A | 685 | 708 | 1.0E-77 |
FunFam | G3DSA:1.10.150.20:FF:000002 | DNA polymerase I | - | - | 694 | 837 | 1.9E-60 |
FunFam | G3DSA:1.10.150.20:FF:000003 | DNA polymerase I | - | - | 170 | 265 | 8.2E-27 |
Gene3D | G3DSA:3.40.50.1010 | - | - | - | 1 | 169 | 1.2E-53 |
SUPERFAMILY | SSF53098 | Ribonuclease H-like | IPR012337 | Ribonuclease H-like superfamily | 311 | 501 | 3.8E-55 |
PRINTS | PR00868 | DNA-polymerase family A (pol I) signature | IPR002298 | DNA polymerase A | 776 | 787 | 1.0E-77 |
SUPERFAMILY | SSF88723 | PIN domain-like | IPR029060 | PIN-like domain superfamily | 5 | 167 | 2.44E-52 |
Gene3D | G3DSA:1.10.150.20 | - | - | - | 694 | 837 | 7.5E-115 |
Gene3D | G3DSA:3.30.420.10 | - | IPR036397 | Ribonuclease H superfamily | 309 | 526 | 9.9E-74 |
PANTHER | PTHR10133 | DNA POLYMERASE I | IPR002298 | DNA polymerase A | 308 | 913 | 0.0 |
CDD | cd06139 | DNA_polA_I_Ecoli_like_exo | - | - | 327 | 523 | 6.20375E-98 |
SMART | SM00474 | 35exoneu6 | IPR002562 | 3'-5' exonuclease domain | 312 | 501 | 1.1E-36 |
Pfam | PF01367 | 5'-3' exonuclease, C-terminal SAM fold | IPR020045 | DNA polymerase I-like, H3TH domain | 168 | 269 | 4.5E-27 |
Gene3D | G3DSA:1.10.150.20 | - | - | - | 170 | 264 | 8.2E-26 |
Pfam | PF00476 | DNA polymerase family A | IPR001098 | DNA-directed DNA polymerase, family A, palm domain | 538 | 911 | 0.0 |
PRINTS | PR00868 | DNA-polymerase family A (pol I) signature | IPR002298 | DNA polymerase A | 798 | 809 | 1.0E-77 |
FunFam | G3DSA:1.20.1060.10:FF:000001 | DNA polymerase I | - | - | 527 | 643 | 2.9E-40 |