Pseudomonas aeruginosa PAO1, PA5503

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00211
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00211
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF52540 IPR027417 P-loop containing nucleoside triphosphate hydrolase 1 241 3.71E-82
SUPERFAMILY SSF55021 262 334 9.27E-17
ProSiteProfiles PS50893 ATP-binding cassette, ABC transporter-type domain profile. IPR003439 ABC transporter-like 2 242 28.958
ProSiteProfiles PS51264 Methionine import ATP-binding protein metN family profile. IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal 235 335 22.5
Pfam PF09383 NIL domain IPR018449 NIL domain 264 333 6.8E-19
Gene3D G3DSA:3.40.50.300 1 246 7.9E-77
ProSitePatterns PS00211 ABC transporters family signature. IPR017871 ABC transporter, conserved site 142 156 -
CDD cd03258 ABC_MetN_methionine_transporter IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain 1 234 5.2194E-140
Pfam PF00005 ABC transporter IPR003439 ABC transporter-like 22 170 6.9E-36
SMART SM00930 IPR018449 NIL domain 261 334 8.6E-25
SMART SM00382 IPR003593 AAA+ ATPase domain 30 219 2.7E-17
Gene3D G3DSA:3.30.70.260 247 335 2.2E-15

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.