Pseudomonas aeruginosa PAO1, PA5505

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Membrane proteins Other PAO1 genes in this class
Transport of small molecules Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF53850 Periplasmic binding protein-like II - - 25 260 4.5E-86
Gene3D G3DSA:3.40.190.10 - - - 26 258 2.2E-109
NCBIfam TIGR00363 JCVI: MetQ/NlpA family lipoprotein IPR004872 Lipoprotein NlpA family 45 259 3.8E-69
Gene3D G3DSA:3.40.190.10 - - - 106 210 2.2E-109
CDD cd13597 PBP2_lipoprotein_Tp32 - - 25 258 0.0
Pfam PF03180 NlpA lipoprotein IPR004872 Lipoprotein NlpA family 25 260 1.4E-103
PANTHER PTHR30429 D-METHIONINE-BINDING LIPOPROTEIN METQ IPR004872 Lipoprotein NlpA family 6 260 3.8E-101
PIRSF PIRSF002854 MetQ IPR004872 Lipoprotein NlpA family 1 260 1.0E-106

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.