Pseudomonas aeruginosa PAO1, PA5516 (pdxY)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0008710 8-amino-7-oxononanoate synthase activity
ISS
Inferred from Sequence or Structural Similarity
ECO:0000044
sequence similarity evidence
Biological Process GO:0051188 obsolete cofactor biosynthetic process
ISS
Inferred from Sequence or Structural Similarity
ECO:0000044
sequence similarity evidence
Molecular Function GO:0008478 pyridoxal kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00687
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009443 pyridoxal 5'-phosphate salvage
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00687
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Biosynthesis of cofactors, prosthetic groups and carriers Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae00750 Vitamin B6 metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCyc PLPSAL-PWY pyridoxal 5'-phosphate salvage I 19.5 ECO:0000250
sequence similarity evidence used in manual assertion
12867747

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR10534 PYRIDOXAL KINASE IPR004625 Pyridoxine kinase 4 280 6.3E-62
Gene3D G3DSA:3.40.1190.20 - IPR029056 Ribokinase-like 1 288 9.1E-90
Hamap MF_01639 Pyridoxal kinase PdxY [pdxY]. IPR023685 Pyridoxal kinase PdxY 4 288 53.947567
Pfam PF08543 Phosphomethylpyrimidine kinase IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase 77 262 4.1E-12
SUPERFAMILY SSF53613 Ribokinase-like IPR029056 Ribokinase-like 4 281 1.31E-70
CDD cd01173 pyridoxal_pyridoxamine_kinase IPR004625 Pyridoxine kinase 7 261 7.44856E-106
NCBIfam TIGR00687 JCVI: pyridoxal kinase IPR004625 Pyridoxine kinase 6 287 7.2E-111
FunFam G3DSA:3.40.1190.20:FF:000008 Pyridoxal kinase PdxY - - 3 288 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.