Pseudomonas aeruginosa PAO1, PA5530

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006835 dicarboxylic acid transport
IMP
Inferred from Mutant Phenotype
ECO:0000315
mutant phenotype evidence used in manual assertion
24794562 Reviewed by curator
Cellular Component GO:0016021 integral component of membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00216
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00216
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00883
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005215 transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00216
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other PAO1 genes in this class
Membrane proteins Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
ProSitePatterns PS00216 Sugar transport proteins signature 1. IPR005829 Sugar transporter, conserved site 299 316 -
SUPERFAMILY SSF103473 IPR036259 MFS transporter superfamily 21 430 4.84E-70
ProSitePatterns PS00217 Sugar transport proteins signature 2. IPR005829 Sugar transporter, conserved site 132 157 -
Pfam PF07690 Major Facilitator Superfamily IPR011701 Major facilitator superfamily 58 376 3.7E-30
TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein IPR004736 MFS transporter, metabolite:H symporter 29 415 4.3E-135
ProSiteProfiles PS50850 Major facilitator superfamily (MFS) profile. IPR020846 Major facilitator superfamily domain 22 427 38.154
CDD cd06174 MFS IPR020846 Major facilitator superfamily domain 23 424 2.78546E-26
Gene3D G3DSA:1.20.1250.20 19 435 1.1E-71

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.