Pseudomonas aeruginosa PAO1, PA5546

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Upstream Motifs

*Up to 500bp upstream
Name Start Stop Strand Evidence PMID
OxyR binding site 6240680 6240694 - ECO:0000314
direct assay evidence used in manual assertion
22275523 Details
Shine-Dalgarno sequence 6240640 6240644 - ECO:0000256
match to sequence model evidence used in automatic assertion
Details
Shine-Dalgarno sequence 6240860 6240863 + ECO:0000256
match to sequence model evidence used in automatic assertion
Details

Downstream motifs

*Up to 500bp downstream
Name Start Stop Strand Evidence PMID
Inverted repeat: GCGACCGGCTCC-N5-GGAGCCGGTCGC 6239413 6239441 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details
Shine-Dalgarno sequence 6239292 6239296 - ECO:0000256
match to sequence model evidence used in automatic assertion
Details