Pseudomonas putida BIRD-1, PPUBIRD1_3212 (infC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003743 translation initiation factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00080
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006413 translational initiation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00080
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:3.10.20.80:FF:000001 Translation initiation factor IF-3 - - 13 87 1.4E-33
Pfam PF00707 Translation initiation factor IF-3, C-terminal domain IPR019815 Translation initiation factor 3, C-terminal 95 180 1.8E-37
SUPERFAMILY SSF54364 Translation initiation factor IF3, N-terminal domain IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily 18 90 6.15E-28
FunFam G3DSA:3.30.110.10:FF:000001 Translation initiation factor IF-3 - - 88 183 1.0E-45
SUPERFAMILY SSF55200 Translation initiation factor IF3, C-terminal domain IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily 95 183 1.31E-33
Pfam PF05198 Translation initiation factor IF-3, N-terminal domain IPR019814 Translation initiation factor 3, N-terminal 19 88 5.1E-30
Hamap MF_00080 Translation initiation factor IF-3 [infC]. IPR001288 Translation initiation factor 3 9 182 30.52821
Gene3D G3DSA:3.10.20.80 - IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily 15 87 6.1E-31
Gene3D G3DSA:3.30.110.10 - IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily 88 183 1.1E-34
NCBIfam TIGR00168 JCVI: translation initiation factor IF-3 IPR001288 Translation initiation factor 3 16 182 3.1E-82
PANTHER PTHR10938 TRANSLATION INITIATION FACTOR IF-3 IPR001288 Translation initiation factor 3 8 183 2.2E-54

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.