Pseudomonas putida BIRD-1, PPUBIRD1_3220

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016301 kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00990
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006014 D-ribose metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd01174
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004747 ribokinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd01174
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppb00030 Pentose phosphate pathway 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd01174 ribokinase IPR011877 Ribokinase 4 296 0.0
Gene3D G3DSA:3.40.1190.20 - IPR029056 Ribokinase-like 1 302 3.9E-106
SUPERFAMILY SSF53613 Ribokinase-like IPR029056 Ribokinase-like 3 300 8.57E-85
PANTHER PTHR10584 SUGAR KINASE - - 5 300 2.6E-91
NCBIfam TIGR02152 JCVI: ribokinase IPR011877 Ribokinase 5 300 7.0E-110
PRINTS PR00990 Ribokinase signature IPR002139 Ribokinase/fructokinase 34 53 4.9E-35
PRINTS PR00990 Ribokinase signature IPR002139 Ribokinase/fructokinase 106 119 4.9E-35
Pfam PF00294 pfkB family carbohydrate kinase IPR011611 Carbohydrate kinase PfkB 3 295 2.0E-72
PRINTS PR00990 Ribokinase signature IPR002139 Ribokinase/fructokinase 219 230 4.9E-35
Hamap MF_01987 Ribokinase [rbsK]. IPR011877 Ribokinase 3 302 27.382439
PRINTS PR00990 Ribokinase signature IPR002139 Ribokinase/fructokinase 175 190 4.9E-35
FunFam G3DSA:3.40.1190.20:FF:000012 Ribokinase - - 1 302 3.9E-107
PRINTS PR00990 Ribokinase signature IPR002139 Ribokinase/fructokinase 7 28 4.9E-35

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.