Pseudomonas putida BIRD-1, PPUBIRD1_3223

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00005
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppb02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 255 505 5.7E-40
FunFam G3DSA:3.40.50.300:FF:000126 Galactose/methyl galactoside import ATP-binding protein MglA - - 261 503 1.8E-91
CDD cd03215 ABC_Carb_Monos_II - - 258 479 2.4705E-78
Pfam PF00005 ABC transporter IPR003439 ABC transporter-like, ATP-binding domain 274 429 2.4E-17
CDD cd03216 ABC_Carb_Monos_I - - 10 224 1.88333E-64
FunFam G3DSA:3.40.50.300:FF:000127 Ribose import ATP-binding protein RbsA - - 5 243 8.3E-82
PANTHER PTHR43790 CARBOHYDRATE TRANSPORT ATP-BINDING PROTEIN MG119-RELATED - - 7 501 0.0
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 33 222 2.8E-10
Pfam PF00005 ABC transporter IPR003439 ABC transporter-like, ATP-binding domain 25 174 1.6E-28
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 273 488 1.09E-40
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 10 231 8.99E-52
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 282 477 0.004
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 2 248 1.8E-54

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.