Pseudomonas putida BIRD-1, PPUBIRD1_3225

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006528 asparagine metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00520
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004067 asparaginase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00520
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppb00471 D-Glutamine and D-glutamate metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppb00220 Arginine biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppb00250 Alanine, aspartate and glutamate metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppb01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppb01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppb02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF17763 Glutaminase/Asparaginase C-terminal domain IPR040919 Asparaginase/glutaminase, C-terminal 248 359 1.8E-21
CDD cd00411 L-asparaginase_like - - 59 356 0.0
FunFam G3DSA:3.40.50.40:FF:000005 Glutaminase-asparaginase - - 248 361 1.2E-75
PRINTS PR00139 Asparaginase/glutaminase family signature IPR006034 Asparaginase/glutaminase-like 37 48 2.3E-21
Gene3D G3DSA:3.40.50.40 - IPR027473 L-asparaginase, C-terminal 248 361 1.6E-31
FunFam G3DSA:3.40.50.1170:FF:000001 L-asparaginase 2 - - 32 247 7.3E-77
PIRSF PIRSF500176 L_ASNase - - 33 362 2.6E-75
PRINTS PR00139 Asparaginase/glutaminase family signature IPR006034 Asparaginase/glutaminase-like 117 135 2.3E-21
Pfam PF00710 Asparaginase, N-terminal IPR027474 L-asparaginase, N-terminal 36 222 2.9E-53
NCBIfam TIGR00520 JCVI: type II asparaginase IPR004550 L-asparaginase, type II 26 362 1.4E-118
SMART SM00870 Asparaginase_2 IPR006034 Asparaginase/glutaminase-like 36 356 5.3E-128
SUPERFAMILY SSF53774 Glutaminase/Asparaginase IPR036152 Asparaginase/glutaminase-like superfamily 34 361 4.06E-97
PIRSF PIRSF001220 L-ASNase_gatD IPR006034 Asparaginase/glutaminase-like 31 362 5.6E-84
Gene3D G3DSA:3.40.50.1170 - IPR037152 L-asparaginase, N-terminal domain superfamily 35 247 2.3E-65
PANTHER PTHR11707 L-ASPARAGINASE IPR006034 Asparaginase/glutaminase-like 28 358 1.5E-38
PRINTS PR00139 Asparaginase/glutaminase family signature IPR006034 Asparaginase/glutaminase-like 295 313 2.3E-21

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.