Pseudomonas syringae pv. syringae B728a, Psyr_3440 (flhA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0044780 bacterial-type flagellum assembly
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01398
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF005419
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009306 protein secretion
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF005419
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psb02040 Flagellar assembly 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00771 FHIPEP family IPR001712 Type III secretion system FHIPEP 32 697 0.0
PRINTS PR00949 Type III secretion system inner membrane A protein family signature IPR001712 Type III secretion system FHIPEP 75 94 3.0E-55
NCBIfam TIGR01398 JCVI: flagellar biosynthesis protein FlhA IPR006301 Flagellar biosynthesis protein FlhA 22 705 0.0
Gene3D G3DSA:3.40.50.12790 FHIPEP family, domain 4 IPR042196 FHIPEP, domain 4 605 705 6.3E-24
PRINTS PR00949 Type III secretion system inner membrane A protein family signature IPR001712 Type III secretion system FHIPEP 38 51 3.0E-55
Gene3D G3DSA:1.10.8.540 FHIPEP family, domain 3 IPR042193 FHIPEP, domain 3 514 601 5.8E-24
PRINTS PR00949 Type III secretion system inner membrane A protein family signature IPR001712 Type III secretion system FHIPEP 142 158 3.0E-55
PRINTS PR00949 Type III secretion system inner membrane A protein family signature IPR001712 Type III secretion system FHIPEP 191 208 3.0E-55
PIRSF PIRSF005419 FlhA IPR001712 Type III secretion system FHIPEP 7 708 0.0
Gene3D G3DSA:3.40.30.60 FHIPEP family, domain 1 IPR042194 FHIPEP, domain 1 370 513 1.4E-50
PRINTS PR00949 Type III secretion system inner membrane A protein family signature IPR001712 Type III secretion system FHIPEP 242 256 3.0E-55
PANTHER PTHR30161 FLAGELLAR EXPORT PROTEIN, MEMBRANE FLHA SUBUNIT-RELATED IPR001712 Type III secretion system FHIPEP 15 706 0.0
PRINTS PR00949 Type III secretion system inner membrane A protein family signature IPR001712 Type III secretion system FHIPEP 161 179 3.0E-55

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.