Pseudomonas aeruginosa UCBPP-PA14, PA14_00190 (fmt)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0022898 regulation of transmembrane transporter activity
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA0018
 ECO:0000249
sequence similarity evidence used in automatic assertion		 19786597
Biological Process GO:0009058 biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.10.25.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004479 methionyl-tRNA formyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00460
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF50486
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0071951 conversion of methionyl-tRNA to N-formyl-methionyl-tRNA
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00460
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Amino acid biosynthesis and metabolism Other UCBPP-PA14 genes in this class
Translation, post-translational modification, degradation Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau00970 Aminoacyl-tRNA biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau00670 One carbon pool by folate 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.50.170 - - - 1 209 1.5E-76
Gene3D G3DSA:3.10.25.10 - IPR037022 Formyl transferase, C-terminal domain superfamily 210 312 5.8E-32
Pfam PF00551 Formyl transferase IPR002376 Formyl transferase, N-terminal 6 184 5.2E-47
SUPERFAMILY SSF53328 Formyltransferase IPR036477 Formyl transferase, N-terminal domain superfamily 5 207 2.62E-67
CDD cd08646 FMT_core_Met-tRNA-FMT_N IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain 5 208 4.02068E-112
Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. IPR005794 Methionyl-tRNA formyltransferase 5 305 37.043446
SUPERFAMILY SSF50486 FMT C-terminal domain-like IPR011034 Formyl transferase-like, C-terminal domain superfamily 208 308 5.3E-31
FunFam G3DSA:3.10.25.10:FF:000009 Methionyl-tRNA formyltransferase - - 210 312 9.1E-68
PANTHER PTHR11138 METHIONYL-TRNA FORMYLTRANSFERASE - - 2 307 9.0E-82
FunFam G3DSA:3.40.50.12230:FF:000001 Methionyl-tRNA formyltransferase - - 5 309 3.4E-112
NCBIfam TIGR00460 JCVI: methionyl-tRNA formyltransferase IPR005794 Methionyl-tRNA formyltransferase 5 306 2.1E-94
FunFam G3DSA:3.40.50.170:FF:000003 Methionyl-tRNA formyltransferase - - 1 209 2.4E-109
CDD cd08704 Met_tRNA_FMT_C IPR044135 Methionyl-tRNA formyltransferase, C-terminal domain 211 294 2.63412E-34
Pfam PF02911 Formyl transferase, C-terminal domain IPR005793 Formyl transferase, C-terminal 207 302 3.3E-25

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.