Pseudomonas aeruginosa UCBPP-PA14, PA14_00910 (icmF1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Hypothetical, unclassified, unknown Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau02025 Biofilm formation - Pseudomonas aeruginosa 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau03070 Bacterial secretion system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR03348 JCVI: type VI secretion system membrane subunit TssM IPR017731 Type VI secretion system protein TssM1-like 8 1100 0.0
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 50 219 1.34E-11
Pfam PF06761 Intracellular multiplication and human macrophage-killing IPR009612 IcmF-related 429 722 2.5E-86
Pfam PF06744 Type VI secretion protein IcmF C2-like domain IPR010623 Type VI secretion system IcmF, C-terminal 977 1083 5.1E-28
Coils Coil Coil - - 21 41 -
CDD cd00882 Ras_like_GTPase - - 55 198 0.00749064
Pfam PF14331 IcmF-related N-terminal domain IPR025743 IcmF-related, N-terminal domain 120 377 4.1E-99
PANTHER PTHR36153 INNER MEMBRANE PROTEIN-RELATED - - 3 1102 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.