Pseudomonas aeruginosa UCBPP-PA14, PA14_01940

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01730
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01730
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01730
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Protein secretion/export apparatus Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:2.40.50.100 - - - 67 209 1.8E-39
SUPERFAMILY SSF111369 HlyD-like secretion proteins - - 57 285 3.4E-25
FunFam G3DSA:2.40.30.170:FF:000014 Efflux RND transporter periplasmic adaptor subunit - - 207 271 2.3E-25
Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain 65 270 2.4E-16
NCBIfam TIGR01730 JCVI: efflux RND transporter periplasmic adaptor subunit IPR006143 RND efflux pump, membrane fusion protein 44 362 1.7E-68
MobiDBLite mobidb-lite consensus disorder prediction - - 363 383 -
Gene3D G3DSA:1.10.287.470 Helix hairpin bin - - 102 175 1.8E-39
Coils Coil Coil - - 146 173 -
Gene3D G3DSA:2.40.420.20 - - - 273 363 3.3E-13
Gene3D G3DSA:2.40.30.170 - - - 61 268 1.8E-39
PANTHER PTHR30469 MULTIDRUG RESISTANCE PROTEIN MDTA - - 9 366 1.6E-83

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.