Pseudomonas aeruginosa UCBPP-PA14, PA14_01970

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00702
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00702
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00702
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.70.1320 Multidrug efflux transporter AcrB pore domain like - - 140 329 0.0
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 441 464 4.6E-22
SUPERFAMILY SSF82714 Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains 707 790 5.23E-15
Gene3D G3DSA:1.20.1640.10 Multidrug efflux transporter AcrB transmembrane domain - - 15 502 0.0
SUPERFAMILY SSF82693 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains - - 141 327 1.39E-17
Gene3D G3DSA:3.30.70.1430 Multidrug efflux transporter AcrB pore domain - - 557 655 0.0
SUPERFAMILY SSF82866 Multidrug efflux transporter AcrB transmembrane domain - - 789 1010 2.62E-44
SUPERFAMILY SSF82866 Multidrug efflux transporter AcrB transmembrane domain - - 295 492 8.24E-32
Gene3D G3DSA:1.20.1640.10 Multidrug efflux transporter AcrB transmembrane domain - - 503 1005 0.0
SUPERFAMILY SSF82693 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains - - 44 139 4.36E-19
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 388 412 4.6E-22
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 42 60 4.6E-22
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 466 489 4.6E-22
SUPERFAMILY SSF82693 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains - - 553 653 2.49E-8
Gene3D G3DSA:3.30.70.1430 Multidrug efflux transporter AcrB pore domain - - 44 803 0.0
Pfam PF00873 AcrB/AcrD/AcrF family IPR001036 Acriflavin resistance protein 8 1005 0.0
Gene3D G3DSA:3.30.2090.10 Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains 184 276 0.0
Gene3D G3DSA:3.30.2090.10 Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains 707 795 0.0
SUPERFAMILY SSF82714 Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains 189 267 7.85E-10
Gene3D G3DSA:3.30.70.1440 Multidrug efflux transporter AcrB pore domain - - 656 857 0.0
PANTHER PTHR32063 - IPR001036 Acriflavin resistance protein 6 1010 0.0
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 334 357 4.6E-22
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 539 556 4.6E-22

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.