Pseudomonas aeruginosa UCBPP-PA14, PA14_03630

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00418
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00418
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00778 Bacterial regulatory protein ArsR family signature IPR001845 HTH ArsR-type DNA-binding domain 59 74 7.5E-5
PANTHER PTHR39168 TRANSCRIPTIONAL REGULATOR-RELATED - - 1 227 5.1E-92
PRINTS PR00778 Bacterial regulatory protein ArsR family signature IPR001845 HTH ArsR-type DNA-binding domain 11 26 7.5E-5
SMART SM00418 arsrmega2 IPR001845 HTH ArsR-type DNA-binding domain 9 88 1.6E-11
Gene3D G3DSA:1.10.10.10 - IPR036388 Winged helix-like DNA-binding domain superfamily 6 94 2.1E-14
PRINTS PR00778 Bacterial regulatory protein ArsR family signature IPR001845 HTH ArsR-type DNA-binding domain 44 59 7.5E-5
SUPERFAMILY SSF46785 Winged helix DNA-binding domain IPR036390 Winged helix DNA-binding domain superfamily 9 86 5.45E-15
CDD cd00090 HTH_ARSR IPR011991 ArsR-like helix-turn-helix domain 11 86 4.63516E-12

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.