Pseudomonas aeruginosa UCBPP-PA14, PA14_04220

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0042597 periplasmic space
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF019574
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0019808 polyamine binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF019574
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015846 polyamine transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF019574
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.190.10 - - - 129 344 7.6E-102
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Spermidine/putrescine-binding periplasmic protein 73 87 1.6E-46
PANTHER PTHR30222 SPERMIDINE/PUTRESCINE-BINDING PERIPLASMIC PROTEIN - - 18 345 3.9E-77
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Spermidine/putrescine-binding periplasmic protein 167 186 1.6E-46
CDD cd13664 PBP2_PotD_PotF_like_3 - - 26 342 0.0
Coils Coil Coil - - 182 202 -
Pfam PF13416 Bacterial extracellular solute-binding protein IPR006059 Bacterial extracellular solute-binding protein 40 300 9.1E-29
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Spermidine/putrescine-binding periplasmic protein 46 67 1.6E-46
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Spermidine/putrescine-binding periplasmic protein 89 102 1.6E-46
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Spermidine/putrescine-binding periplasmic protein 293 319 1.6E-46
Gene3D G3DSA:3.40.190.10 - - - 27 315 7.6E-102
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Spermidine/putrescine-binding periplasmic protein 30 46 1.6E-46
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Spermidine/putrescine-binding periplasmic protein 248 267 1.6E-46
SUPERFAMILY SSF53850 Periplasmic binding protein-like II - - 24 346 1.13E-82
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Spermidine/putrescine-binding periplasmic protein 120 136 1.6E-46
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Spermidine/putrescine-binding periplasmic protein 204 223 1.6E-46
PIRSF PIRSF019574 Periplasmic_polyamine_BP IPR001188 Spermidine/putrescine-binding periplasmic protein 5 347 7.3E-109

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.