Pseudomonas aeruginosa UCBPP-PA14, PA14_04390 (ygdP)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_04390
Name
ygdP
Replicon chromosome
Genomic location 392268 - 392747 (+ strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq YP_788507.1
GI 116054064
Entrez 4383742
INSDC ABJ15300.1
NCBI Locus Tag PA14_04390
UniParc UPI0000130902
UniProtKB Acc Q02U79
UniProtKB ID RPPH_PSEAB
UniRef100 UniRef100_A6UYD9
UniRef50 UniRef50_A6UYD9
UniRef90 UniRef90_A6UYD9

Product

Feature Type CDS
Coding Frame 1
Product Name
dinucleoside polyphosphate hydrolase
Synonyms
Evidence for Translation
Charge (pH 7) 4.17
Kyte-Doolittle Hydrophobicity Value -0.500
Molecular Weight (kDa) 18.7
Isoelectric Point (pI) 9.51

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 247 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000328 (533 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_04390
Search term: ygdP

Human Homologs

References

No references are associated with this feature.