Pseudomonas aeruginosa UCBPP-PA14, PA14_04420

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF08447
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Two-component regulatory systems Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR46663 DIGUANYLATE CYCLASE DGCT-RELATED - - 57 375 4.5E-65
CDD cd00130 PAS IPR000014 PAS domain 62 167 1.15503E-6
SUPERFAMILY SSF55073 Nucleotide cyclase IPR029787 Nucleotide cyclase 225 370 8.63E-44
SMART SM00267 duf1_3 IPR000160 GGDEF domain 209 376 9.9E-58
Pfam PF00990 Diguanylate cyclase, GGDEF domain IPR000160 GGDEF domain 221 369 6.8E-45
Pfam PF08447 PAS fold IPR013655 PAS fold-3 75 163 5.6E-24
Gene3D G3DSA:3.30.450.20 PAS domain - - 47 165 9.2E-36
FunFam G3DSA:3.30.70.270:FF:000001 Diguanylate cyclase domain protein - - 215 376 1.3E-49
Coils Coil Coil - - 177 197 -
Gene3D G3DSA:3.30.70.270 - IPR043128 Reverse transcriptase/Diguanylate cyclase domain 206 375 4.5E-53
SMART SM00091 pas_2 IPR000014 PAS domain 52 120 4.7E-5
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 58 171 1.1E-18
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 51 177 3.3E-7
CDD cd01949 GGDEF IPR000160 GGDEF domain 222 374 9.92575E-54
NCBIfam TIGR00254 JCVI: diguanylate cyclase (GGDEF) domain IPR000160 GGDEF domain 217 369 4.9E-45

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.