Pseudomonas aeruginosa UCBPP-PA14, PA14_04900 (ftsY)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005525 GTP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00962
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006614 SRP-dependent cotranslational protein targeting to membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00962
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Protein secretion/export apparatus Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau02024 Quorum sensing 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau03070 Bacterial secretion system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau03060 Protein export 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd17874 FtsY - - 246 444 2.80758E-119
Pfam PF00448 SRP54-type protein, GTPase domain IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain 246 445 3.7E-77
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 240 450 2.3E-82
FunFam G3DSA:3.40.50.300:FF:000053 Signal recognition particle receptor FtsY - - 238 446 8.3E-102
SUPERFAMILY SSF47364 Domain of the SRP/SRP receptor G-proteins IPR036225 SRP/SRP receptor, N-terminal 144 224 1.03E-20
Coils Coil Coil - - 342 362 -
NCBIfam TIGR00064 JCVI: signal recognition particle-docking protein FtsY IPR004390 Signal-recognition particle receptor FtsY 174 445 3.7E-109
Pfam PF02881 SRP54-type protein, helical bundle domain IPR013822 Signal recognition particle SRP54, helical bundle 161 226 2.0E-13
Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. IPR004390 Signal-recognition particle receptor FtsY 173 446 62.411751
PANTHER PTHR43134 SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT ALPHA - - 39 445 8.0E-101
Gene3D G3DSA:1.20.120.140 - IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily 145 235 9.9E-25
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 244 391 2.0E-8
MobiDBLite mobidb-lite consensus disorder prediction - - 1 136 -
FunFam G3DSA:1.20.120.140:FF:000002 Signal recognition particle receptor FtsY - - 139 234 3.7E-28
SMART SM00963 SRP54_N_2 IPR013822 Signal recognition particle SRP54, helical bundle 149 230 2.5E-24
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 243 445 6.5E-52
SMART SM00962 SRP54_3 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain 245 446 6.2E-122

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.