Pseudomonas aeruginosa UCBPP-PA14, PA14_05220

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Amino acid biosynthesis and metabolism Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau00260 Glycine, serine and threonine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01130 Biosynthesis of antibiotics 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau00270 Cysteine and methionine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01230 Biosynthesis of amino acids 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes IPR036052 Tryptophan synthase beta chain-like, PALP domain superfamily 6 321 1.96E-92
SUPERFAMILY SSF54631 CBS-domain pair IPR046342 CBS domain superfamily 334 454 6.7E-18
Pfam PF00291 Pyridoxal-phosphate dependent enzyme IPR001926 Tryptophan synthase beta chain-like, PALP domain 11 303 1.6E-64
CDD cd04608 CBS_pair_CBS IPR046353 Cystathionine beta-synthase, C-terminal domain 334 451 1.62127E-42
PANTHER PTHR10314 CYSTATHIONINE BETA-SYNTHASE - - 8 318 4.2E-94
Gene3D G3DSA:3.10.580.10 - IPR046342 CBS domain superfamily 316 457 1.0E-15
Gene3D G3DSA:3.40.50.1100 - IPR036052 Tryptophan synthase beta chain-like, PALP domain superfamily 42 155 3.2E-108
CDD cd01561 CBS_like - - 14 310 0.0
Pfam PF00571 CBS domain IPR000644 CBS domain 344 387 1.1E-9
Gene3D G3DSA:3.40.50.1100 - IPR036052 Tryptophan synthase beta chain-like, PALP domain superfamily 13 309 3.2E-108
FunFam G3DSA:3.40.50.1100:FF:000003 Cystathionine beta-synthase - - 42 155 1.9E-44
SMART SM00116 cbs_1 IPR000644 CBS domain 344 391 1.8E-7

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.