Pseudomonas aeruginosa UCBPP-PA14, PA14_05230

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0019346 transsulfuration
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR11808
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0030170 pyridoxal phosphate binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR11808
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Amino acid biosynthesis and metabolism Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau01230 Biosynthesis of amino acids 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau00270 Cysteine and methionine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau00450 Selenocompound metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01130 Biosynthesis of antibiotics 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau00260 Glycine, serine and threonine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:3.90.1150.10:FF:000008 Cystathionine gamma-synthase - - 260 393 1.8E-59
Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme 17 391 0.0
Gene3D G3DSA:3.40.640.10 - IPR015421 Pyridoxal phosphate-dependent transferase, major domain 13 259 3.8E-97
PIRSF PIRSF001434 CGS IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme 1 394 0.0
PANTHER PTHR11808 TRANS-SULFURATION ENZYME FAMILY MEMBER IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme 15 393 0.0
CDD cd00614 CGS_like IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme 31 392 0.0
Gene3D G3DSA:3.90.1150.10 Aspartate Aminotransferase, domain 1 IPR015422 Pyridoxal phosphate-dependent transferase, small domain 260 394 1.9E-59
FunFam G3DSA:3.40.640.10:FF:000009 Cystathionine gamma-synthase homolog - - 13 258 7.9E-100
SUPERFAMILY SSF53383 PLP-dependent transferases IPR015424 Pyridoxal phosphate-dependent transferase 17 393 5.32E-121

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.