Pseudomonas aeruginosa UCBPP-PA14, PA14_05960

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0003676	nucleic acid binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PIRSF002599	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PIRSF	PIRSF002599	Cold_shock_A	IPR012156	Cold shock, CspA	1	69	1.3E-23
CDD	cd04458	CSP_CDS	IPR002059	Cold-shock protein, DNA-binding	4	67	1.15053E-29
PANTHER	PTHR11544	COLD SHOCK DOMAIN CONTAINING PROTEINS	-	-	4	65	8.5E-23
Gene3D	G3DSA:2.40.50.140	-	IPR012340	Nucleic acid-binding, OB-fold	4	45	3.1E-22
SUPERFAMILY	SSF50249	Nucleic acid-binding proteins	IPR012340	Nucleic acid-binding, OB-fold	3	68	4.41E-25
Pfam	PF00313	'Cold-shock' DNA-binding domain	IPR002059	Cold-shock protein, DNA-binding	5	67	4.9E-29
Gene3D	G3DSA:6.20.370.130	-	-	-	46	66	1.6E-5
PRINTS	PR00050	Cold shock protein signature	IPR002059	Cold-shock protein, DNA-binding	26	35	1.7E-18
SMART	SM00357	csp_8	IPR011129	Cold shock domain	5	68	3.6E-29
FunFam	G3DSA:2.40.50.140:FF:000006	Cold shock protein CspC	-	-	3	68	2.2E-31
PRINTS	PR00050	Cold shock protein signature	IPR002059	Cold-shock protein, DNA-binding	41	59	1.7E-18
PRINTS	PR00050	Cold shock protein signature	IPR002059	Cold-shock protein, DNA-binding	6	21	1.7E-18

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.