Pseudomonas aeruginosa UCBPP-PA14, PA14_05990

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00711
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07690
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07690
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other UCBPP-PA14 genes in this class
Membrane proteins Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR01036 Tetracycline resistance protein TetB signature - - 18 42 1.5E-5
Gene3D G3DSA:1.20.1250.20 MFS general substrate transporter like domains IPR036259 MFS transporter superfamily 262 465 6.8E-13
SUPERFAMILY SSF103473 MFS general substrate transporter IPR036259 MFS transporter superfamily 4 467 2.22E-62
Pfam PF07690 Major Facilitator Superfamily IPR011701 Major facilitator superfamily 20 410 2.5E-48
FunFam G3DSA:1.20.1720.10:FF:000001 Putative multidrug resistance protein MdtD - - 16 226 2.1E-101
PANTHER PTHR42718 MAJOR FACILITATOR SUPERFAMILY MULTIDRUG TRANSPORTER MFSC - - 17 468 3.4E-85
CDD cd17503 MFS_LmrB_MDR_like - - 19 457 1.32733E-92
FunFam G3DSA:1.20.1250.20:FF:000021 Putative multidrug resistance protein MdtD - - 260 464 1.8E-79
PRINTS PR01036 Tetracycline resistance protein TetB signature - - 139 163 1.5E-5
NCBIfam TIGR00711 JCVI: DHA2 family efflux MFS transporter permease subunit IPR004638 Drug resistance transporter EmrB-like 19 417 1.5E-77
PRINTS PR01036 Tetracycline resistance protein TetB signature - - 109 129 1.5E-5
Gene3D G3DSA:1.20.1720.10 Multidrug resistance protein D - - 16 247 6.6E-48

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.