Pseudomonas aeruginosa UCBPP-PA14, PA14_06130

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:2.130.10.10
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016835 carbon-oxygen lyase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF026412
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0046677 response to antibiotic
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF026412
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0017001 antibiotic catabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF026412
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000287 magnesium ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF026412
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Adaptation, Protection Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR40274 VIRGINIAMYCIN B LYASE - - 25 315 2.1E-75
SUPERFAMILY SSF101898 NHL repeat - - 31 274 1.6E-31
MobiDBLite mobidb-lite consensus disorder prediction - - 282 308 -
Gene3D G3DSA:2.40.10.500 - - - 22 104 3.1E-6
Coils Coil Coil - - 314 316 -
Gene3D G3DSA:2.130.10.10 - IPR015943 WD40/YVTN repeat-like-containing domain superfamily 108 315 9.9E-27
PIRSF PIRSF026412 Streptogrm_lyase IPR011217 Streptogramin lyase 1 316 6.3E-123

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.