Pseudomonas aeruginosa UCBPP-PA14, PA14_07110

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00418
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00418
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008757 S-adenosylmethionine-dependent methyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF53335
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00778 Bacterial regulatory protein ArsR family signature IPR001845 HTH ArsR-type DNA-binding domain 67 82 9.6E-10
Pfam PF12840 Helix-turn-helix domain - - 19 75 1.7E-11
PRINTS PR00778 Bacterial regulatory protein ArsR family signature IPR001845 HTH ArsR-type DNA-binding domain 20 35 9.6E-10
SUPERFAMILY SSF53335 S-adenosyl-L-methionine-dependent methyltransferases IPR029063 S-adenosyl-L-methionine-dependent methyltransferase superfamily 157 313 1.67E-36
PRINTS PR00778 Bacterial regulatory protein ArsR family signature IPR001845 HTH ArsR-type DNA-binding domain 52 67 9.6E-10
CDD cd02440 AdoMet_MTases - - 168 267 1.50186E-14
CDD cd00090 HTH_ARSR IPR011991 ArsR-like helix-turn-helix domain 21 83 2.14476E-13
NCBIfam NF033788 NCBIFAM: metalloregulator ArsR/SmtB family transcription factor - - 17 83 1.5E-19
Gene3D G3DSA:1.10.10.10 - IPR036388 Winged helix-like DNA-binding domain superfamily 4 107 7.4E-20
PANTHER PTHR43861 TRANS-ACONITATE 2-METHYLTRANSFERASE-RELATED - - 157 272 1.1E-15
SMART SM00418 arsrmega2 IPR001845 HTH ArsR-type DNA-binding domain 18 95 6.7E-12
Pfam PF08241 Methyltransferase domain IPR013216 Methyltransferase type 11 170 264 9.0E-18
Gene3D G3DSA:3.40.50.150 Vaccinia Virus protein VP39 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase superfamily 125 329 3.6E-34
SUPERFAMILY SSF46785 Winged helix DNA-binding domain IPR036390 Winged helix DNA-binding domain superfamily 10 206 2.69E-25

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.