Pseudomonas aeruginosa UCBPP-PA14, PA14_07730 (ksgA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006364 rRNA processing
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00607
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00607
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000154 rRNA modification
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00650
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008649 rRNA methyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00650
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcription, RNA processing and degradation Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
ProSiteProfiles PS51689 rRNA adenine N(6)-methyltransferase family profile. IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm 9 265 89.147
SUPERFAMILY SSF53335 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase 7 264 1.41E-79
ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. IPR020596 Ribosomal RNA adenine methylase transferase, conserved site 39 66 -
CDD cd02440 AdoMet_MTases 38 127 0.00613168
TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A IPR011530 Ribosomal RNA adenine dimethylase 7 261 2.1E-83
Pfam PF00398 Ribosomal RNA adenine dimethylase IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm 7 261 2.5E-64
Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. IPR011530 Ribosomal RNA adenine dimethylase 7 262 58.021
Gene3D G3DSA:3.40.50.150 1 198 2.6E-68
Gene3D G3DSA:1.10.8.100 IPR023165 rRNA adenine dimethylase-like 199 264 2.3E-26
SMART SM00650 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal 23 195 4.0E-88

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.