Pseudomonas aeruginosa UCBPP-PA14, PA14_07770 (ostA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0043165 Gram-negative-bacterium-type cell outer membrane assembly
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01411
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0061024 membrane organization
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF04453
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0019867 outer membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF04453
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0010033 response to organic substance
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01411
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015920 lipopolysaccharide transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01411
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0009279 cell outer membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01411
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Adaptation, Protection Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR30189 LPS-ASSEMBLY PROTEIN - - 5 916 0.0
MobiDBLite mobidb-lite consensus disorder prediction - - 58 87 -
Pfam PF04453 LPS transport system D IPR007543 LptD, C-terminal 403 831 1.8E-120
Pfam PF03968 LptA/(LptD N-terminal domain) LPS transport protein IPR005653 Organic solvent tolerance-like, N-terminal 158 291 3.8E-10
MobiDBLite mobidb-lite consensus disorder prediction - - 58 102 -
Gene3D G3DSA:2.60.450.10 Lipopolysaccharide (LPS) transport protein A like domain - - 152 302 3.0E-8
Hamap MF_01411 LPS-assembly protein LptD [lptD]. IPR020889 LPS-assembly protein LptD 15 899 20.559807

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.