Pseudomonas aeruginosa UCBPP-PA14, PA14_07910 (rpe)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006098 pentose-phosphate shunt
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF001461
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00429
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0005975 carbohydrate metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00429
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004750 ribulose-phosphate 3-epimerase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF001461
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Energy metabolism Other UCBPP-PA14 genes in this class
Central intermediary metabolism Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau01130 Biosynthesis of antibiotics 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau00030 Pentose phosphate pathway 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01200 Carbon metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01230 Biosynthesis of amino acids 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau00040 Pentose and glucuronate interconversions 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR01163 JCVI: ribulose-phosphate 3-epimerase IPR026019 Ribulose-phosphate 3-epimerase 6 216 1.6E-98
Hamap MF_02227 Ribulose-phosphate 3-epimerase [rpe]. IPR026019 Ribulose-phosphate 3-epimerase 3 218 60.094696
PANTHER PTHR11749 RIBULOSE-5-PHOSPHATE-3-EPIMERASE IPR000056 Ribulose-phosphate 3-epimerase-like 5 223 4.5E-79
Gene3D G3DSA:3.20.20.70 Aldolase class I IPR013785 Aldolase-type TIM barrel 1 223 4.6E-94
CDD cd00429 RPE IPR000056 Ribulose-phosphate 3-epimerase-like 6 216 8.27531E-122
Pfam PF00834 Ribulose-phosphate 3 epimerase family IPR000056 Ribulose-phosphate 3-epimerase-like 6 203 4.2E-89
PIRSF PIRSF001461 RPE IPR026019 Ribulose-phosphate 3-epimerase 1 224 6.4E-103
FunFam G3DSA:3.20.20.70:FF:000004 Ribulose-phosphate 3-epimerase - - 1 222 1.2E-101
SUPERFAMILY SSF51366 Ribulose-phoshate binding barrel IPR011060 Ribulose-phosphate binding barrel 4 217 7.85E-76

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.