Pseudomonas aeruginosa UCBPP-PA14, PA14_08440

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Putative enzymes Other UCBPP-PA14 genes in this class
Carbon compound catabolism Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature IPR002347 Short-chain dehydrogenase/reductase SDR 132 140 1.3E-10
SUPERFAMILY SSF51735 IPR036291 NAD(P)-binding domain superfamily 3 256 5.8E-63
PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature IPR002347 Short-chain dehydrogenase/reductase SDR 152 171 1.3E-10
PRINTS PR00081 Glucose/ribitol dehydrogenase family signature IPR002347 Short-chain dehydrogenase/reductase SDR 4 21 1.1E-24
Coils Coil 67 87 -
Gene3D G3DSA:3.40.50.720 3 257 4.5E-62
PRINTS PR00081 Glucose/ribitol dehydrogenase family signature IPR002347 Short-chain dehydrogenase/reductase SDR 79 90 1.1E-24
PIRSF PIRSF000126 1 260 1.9E-69
PRINTS PR00081 Glucose/ribitol dehydrogenase family signature IPR002347 Short-chain dehydrogenase/reductase SDR 173 190 1.1E-24
SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 186 6.6E-4
PRINTS PR00081 Glucose/ribitol dehydrogenase family signature IPR002347 Short-chain dehydrogenase/reductase SDR 152 171 1.1E-24
CDD cd05233 SDR_c 5 213 2.12662E-52
PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature IPR002347 Short-chain dehydrogenase/reductase SDR 79 90 1.3E-10
Pfam PF00106 short chain dehydrogenase IPR002347 Short-chain dehydrogenase/reductase SDR 4 192 3.4E-46
PRINTS PR00081 Glucose/ribitol dehydrogenase family signature IPR002347 Short-chain dehydrogenase/reductase SDR 126 142 1.1E-24

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.