Pseudomonas aeruginosa UCBPP-PA14, PA14_08540
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0042834 | peptidoglycan binding |
Inferred from Sequence Model
Term mapped from: InterPro:PF04225
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| FunFam | G3DSA:2.70.70.10:FF:000002 | Murein DD-endopeptidase MepM | - | - | 280 | 409 | 1.8E-54 |
| CDD | cd12797 | M23_peptidase | - | - | 308 | 393 | 2.57683E-40 |
| Pfam | PF04225 | Opacity-associated protein A LysM-like domain | IPR007340 | Opacity-associated protein A | 81 | 160 | 9.5E-11 |
| SUPERFAMILY | SSF51261 | Duplicated hybrid motif | IPR011055 | Duplicated hybrid motif | 156 | 404 | 2.41E-73 |
| Pfam | PF19425 | Csd3 second domain | IPR045834 | Csd3-like, second N-terminal domain | 174 | 294 | 8.8E-13 |
| Gene3D | G3DSA:2.70.70.10 | Glucose Permease (Domain IIA) | IPR011055 | Duplicated hybrid motif | 278 | 410 | 7.5E-90 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 32 | 56 | - |
| Gene3D | G3DSA:3.10.450.350 | - | - | - | 182 | 432 | 7.5E-90 |
| Gene3D | G3DSA:3.10.450.350 | - | - | - | 71 | 163 | 2.8E-16 |
| PANTHER | PTHR21666 | PEPTIDASE-RELATED | - | - | 78 | 408 | 2.0E-46 |
| Pfam | PF01551 | Peptidase family M23 | IPR016047 | Peptidase M23 | 307 | 403 | 1.8E-32 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 20 | 77 | - |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.