Pseudomonas aeruginosa UCBPP-PA14, PA14_45370 (ccmB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0015886 heme transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF03379
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF03379
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0017004 cytochrome complex assembly
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF03379
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0015232 heme transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF03379
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other UCBPP-PA14 genes in this class
Membrane proteins Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 78 101 5.9E-70
PIRSF PIRSF002764 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria 1 222 5.5E-81
PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 55 72 5.9E-70
PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 134 157 5.9E-70
PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 103 121 5.9E-70
PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 195 218 5.9E-70
PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 29 50 5.9E-70
Pfam PF03379 CcmB protein IPR003544 Cytochrome c-type biogenesis protein CcmB 6 219 9.6E-84
TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria 8 218 1.5E-86

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.