Pseudomonas aeruginosa UCBPP-PA14, PA14_45540 (motD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0071978 bacterial-type flagellum-dependent swarming motility
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA1461
 ECO:0000249
sequence similarity evidence used in automatic assertion		 15629949
Biological Process GO:0071973 bacterial-type flagellum-dependent cell motility
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA1461
 ECO:0000249
sequence similarity evidence used in automatic assertion		 15375113

Functional Classifications Manually Assigned by PseudoCAP

Motility & Attachment Other UCBPP-PA14 genes in this class
Chemotaxis Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau02040 Flagellar assembly 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau02030 Bacterial chemotaxis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00691 OmpA family IPR006665 OmpA-like domain 145 234 9.3E-17
MobiDBLite mobidb-lite consensus disorder prediction - - 249 296 -
CDD cd07185 OmpA_C-like IPR006665 OmpA-like domain 134 240 1.11883E-33
MobiDBLite mobidb-lite consensus disorder prediction - - 63 96 -
Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB IPR025713 Motility protein B-like, N-terminal domain 4 57 7.4E-22
MobiDBLite mobidb-lite consensus disorder prediction - - 66 85 -
Gene3D G3DSA:3.30.1330.60 - IPR036737 OmpA-like domain superfamily 77 255 1.2E-37
PANTHER PTHR30329 STATOR ELEMENT OF FLAGELLAR MOTOR COMPLEX - - 2 242 2.9E-55
SUPERFAMILY SSF103088 OmpA-like IPR036737 OmpA-like domain superfamily 127 240 1.7E-30

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.