Pseudomonas aeruginosa UCBPP-PA14, PA14_45740 (fliR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01400
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0044780 bacterial-type flagellum assembly
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01400
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006605 protein targeting
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30065
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Adaptation, Protection Other UCBPP-PA14 genes in this class
Chemotaxis Other UCBPP-PA14 genes in this class
Motility & Attachment Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau02040 Flagellar assembly 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF01311 Bacterial export proteins, family 1 IPR002010 Type III secretion system inner membrane R protein 14 243 1.0E-67
NCBIfam TIGR01400 JCVI: flagellar biosynthetic protein FliR IPR006303 Flagellar biosynthesis protein FliR 14 255 5.2E-82
PRINTS PR00953 Type III secretion system inner membrane R protein family signature IPR002010 Type III secretion system inner membrane R protein 22 43 1.0E-27
PANTHER PTHR30065 FLAGELLAR BIOSYNTHETIC PROTEIN FLIR IPR002010 Type III secretion system inner membrane R protein 3 256 8.1E-77
PRINTS PR00953 Type III secretion system inner membrane R protein family signature IPR002010 Type III secretion system inner membrane R protein 180 202 1.0E-27
PRINTS PR00953 Type III secretion system inner membrane R protein family signature IPR002010 Type III secretion system inner membrane R protein 202 221 1.0E-27
PRINTS PR00953 Type III secretion system inner membrane R protein family signature IPR002010 Type III secretion system inner membrane R protein 81 100 1.0E-27

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.